DOP1A Gene - GeneCards | DOP1 Protein | DOP1 Antibody
DOP1A (DOP1 Leucine Zipper Like Protein A) is a Protein Coding gene. Diseases associated with DOP1A include Immunodeficiency 23 and Hyper-Ige Recurrent Infection Syndrome 1, Autosomal Dominant . An important paralog of this gene is DOP1B. UniProtKB/Swiss-Prot Summary for DOP1A Gene
Ovo-dop-1 (gene) - WormBase : Nematode Information Resource
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DOP1B Gene - GeneCards | DOP2 Protein | DOP2 Antibody
DOP1B (DOP1 Leucine Zipper Like Protein B) is a Protein Coding gene. Diseases associated with DOP1B include Seborrheic Infantile Dermatitis and Peters-Plus Syndrome . An important paralog of this gene is DOP1A. UniProtKB/Swiss-Prot Summary for DOP1B Gene May play a role in regulating membrane trafficking of cargo proteins.
FlyBase Gene Report: Dmeldop
Gene Model Status Current Stock Availability 12 publicly available Gene Summary drop out ( dop) encodes a microtubule-associated Ser/Thr (MAST) protein kinase. Among its potential substrates is the microtubule motor Dynein. The product of dop is required for membrane growth and polarity during cell formation in the early cleavage stage embryo.
dop-1 G_PROTEIN_RECEP_F1_2 domain-containing protein []
NLP-12 release from DVA is regulated through the D1-like dopamine receptor DOP-1, and both nlp-12 and dop-1 are required for normal local food searching responses Coexpressed D1- and D2-like dopamine receptors antagonistically modulate acetylcholine release in Caenorhabditis elegans.
- What is a nematode ITS2 rDNA database?
- In this paper, we describe the development of a nematode ITS2 rDNA database and the software to create ITS2 databases for any taxonomy. The nematode ITS2 database was constructed using markerDB, which we have provided as an open-source tool to quickly and reliably construct an ITS2 database for any NCBI taxonomic level.
- Are there any eukaryotic ITS2 databases for nematodes?
- A eukaryotic ITS2 database has been previously published [ 7] but has not been updated since 2015 and contains only 1347 sequences in the Nematoda phylum. To our knowledge no other good ITS2 databases exist for nematodes.
- What is Nematoda taxonomy ID 6231?
- The taxonomy id for “Nematoda” 6231 was used with the programs get_species_taxids.sh and blastdbcmd, also part of the ncbi-blast-2.11.0+ suite, to obtain a fasta file of sequences corresponding to nematodes. Then, only those sequences that included “18S” in their identifiers were kept: a total of 21,330 sequences.
- Are nematode genes sequenced?
- It is also one of the most sequenced nematode genes; thus, ample sequence data are present in public databases for comparison (Peham et al. 2017).
- Why is the PR2 database used in nematode community analysis?
- Initially designed to encompass only protistan rDNA sequences, the PR2 database has been expanded for use in nematode community analyses in response to plant range expansion (Geisen et al. 2018) and nematode communities in relation to field management (Harkes et al. 2020).
- Which gene is used for nematode metabarcoding?
- Originally, nematode metabarcoding was performed with the mitochondrial cytochrome oxidase I (COI) gene because the gene provided good taxonomic resolution of closely related species (Sikder et al. 2020) but the drawback to using the COI gene is that there is poor representation of COI nematode genes in the public database (Ahmed et al. 2019).
